LOVD PLA2G6 homepage

General information
Gene name phospholipase A2, group VI (cytosolic, calcium-independent)
Gene symbol PLA2G6
Chromosome Location 22q13.1
Database location http://grenada.lumc.nl/LOVD2/shared1
Curator Danielle Crompton, Dr Manju Kurian, Dr. Derek Lim and Sue Richards
PubMed references View all (unique) PubMed references in the PLA2G6 database
Date of creation March 29, 2010
Last update June 30, 2011
Version PLA2G6 110630
Add sequence variant Submit a sequence variant
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Reference sequence file Genomic reference sequence for describing sequence variants
Genomic refseq ID NG_007094.1
Transcript refseq ID NM_003560.2
Exon/intron information Exon/intron information table
Total number of unique DNA variants reported 81
Total number of individuals with variant(s) 129
Total number of variants reported 171
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Graphical displays and utilities
Summary tables Summary of all sequence variants in the PLA2G6 database, sorted by type of variant (with graphical displays and statistics)
Reading-frame checker The Reading-frame checker generates a prediction of the effect of whole-exon changes
UCSC Genome Browser Show variants in the UCSC Genome Browser (compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Sequence variant tables
Unique sequence variants Listing of all unique sequence variants in the PLA2G6 database, without patient data
Complete sequence variant listing Listing of all sequence variants in the PLA2G6 database
Variants with no known pathogenicity Listing of all PLA2G6 variants reported to have no noticeable phenotypic effect (note: excluding variants of unknown effect)

Search the database
By type of variant View all sequence variants of a certain type
Simple search Query the database by selecting the most important variables (exon number, type of variant, disease phenotype)
Advanced search Query the database by selecting a combination of variables
Based on patient origin View all variants based on your patient origin search terms

Links to other resources
HGNC 9039
Entrez Gene 8398
OMIM - Gene 603604
OMIM - Disease #1 Infantile onset PLAN (classical infantile neuroaxonal dystrophy)
OMIM - Disease #2 Childhood onset PLAN (atypical neuroaxonal dystrophy)
OMIM - Disease #3 Adult onset PLAN (dystonia parkinsonism)
UniProtKB (SwissProt/TrEMBL) O60733
External link Orphanet

Copyright & disclaimer
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We have used all reasonable efforts to ensure that the information displayed on these pages and contained in the databases is of high quality. We make no warranty, express or implied, as to its accuracy or that the information is fit for a particular purpose, and will not be held responsible for any consequences arising out of any inaccuracies or omissions. Individuals, organisations and companies which use this database do so on the understanding that no liability whatsoever either direct or indirect shall rest upon the curator(s) or any of their employees or agents for the effects of any product, process or method that may be produced or adopted by any part, notwithstanding that the formulation of such product, process or method may be based upon information here provided.