LOVD - Variant listings for SPRED1

About this overview [Show]

Patient data (#0063643)
Patient ID UOP-1
Disease multiple CALMs
Phenotype additional > 6 CALS
Remarks -
Ref_pat-pheno Eva Trevisson, University of Padova, Italy, Italy:Padova
Inherit germline (inherited)
Consang. no
Fam_Pat -
# Reported 1
Geographic origin Italy
Ethnic origin -
Gender F
Phenotype/Onset First months
Histology -
Submitter Eva Trevisson

Variant data
Allele Paternal (confirmed)
Reported pathogenicity Probably no pathogenicity
Concluded pathogenicity Unknown
Exon 1
DNA change c.27C>A   (View in UCSC Genome Browser, Ensembl)
RNA change r.(?)
Protein p.(Asp9Glu)
Domains EVH-1
Type Substitution
Variant predicted effect missense
Genetic origin familial
Technique gDNA SEQ
Tissue blood
Template DNA
DB-ID SPRED1_00134
Reference Trevisson, University of Padova, unpublished novel mutation
Variant remarks -
do not use familial
Evol cons in C. jacchus yes
Evol cons in M. musculus yes
Evol cons in R. norvegicus yes
Evol cons in B. taurus yes
Evol cons in O. cuniculus no
Evol cons in X. tropicalis yes
Evol cons in D. rerio no
Evol cons in D. melanogaster unknown
PC12 functional assay not available
ELK1 functional assay not available

1 entry in SPRED1

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
Domains Descending
Ascending
Type Descending
Ascending
Variant predicted effect Descending
Ascending
Genetic origin Descending
Ascending
Technique Descending
Ascending
Tissue Descending
Ascending
Template Descending
Ascending
DB-ID Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
do not use Descending
Ascending
Evol cons in C. jacchus Descending
Ascending
Evol cons in M. musculus Descending
Ascending
Evol cons in R. norvegicus Descending
Ascending
Evol cons in B. taurus Descending
Ascending
Evol cons in O. cuniculus Descending
Ascending
Evol cons in X. tropicalis Descending
Ascending
Evol cons in D. rerio Descending
Ascending
Evol cons in D. melanogaster Descending
Ascending
PC12 functional assay Descending
Ascending
ELK1 functional assay Descending
Ascending
-?/? Paternal (confirmed) 1 c.27C>A r.(?) p.(Asp9Glu) EVH-1 Substitution missense familial gDNA SEQ blood DNA SPRED1_00134 Trevisson, University of Padova, unpublished novel mutation - familial yes yes yes yes no yes no unknown not available not available